Welcome to Pengyu Hong's Homepage

Bioinformatics and Computational Biology

I am taking an integrated approach, which combines computational with experimental methods, to understand causal and functional relationships that regulate the dynamics of biological networks and lead various extra-cellular stimuli to numerous cellular phenotypes. My focuses are three-fold: signal transduction networks, transcriptional regulatory networks, and image-based functional genomics. I am also interested in developing human-computer interfaces to facilitate biological and biomedical research.

	High-content image analysis
	Signal transduction networks
	Automatic Inference of Multicellular Regulatory Networks ( C. elegans vulval induction and Drosophila eye development)
	Proteomics (Isotopic Distribution Computation)
	MotifBooster. (Transcriptional regulatory motif modeling and discovery)
	GeneNotes. (Multimedia biological information management)